What are the indications for antibiotic treatment in cases of acute infectious diarrhoea?

Guideline-aligned answer with reasoning, red flags and references. Clinically reviewed by Dr Kola Tytler MBBS CertHE MBA MRCGP.

Posted: 16 August 2025Updated: 16 August 2025 Guideline-Aligned (High Confidence) Clinically Reviewed
Dr Kola Tytler MBBS CertHE MBA MRCGPClinical Lead • iatroX

Antibiotic treatment is generally not routinely recommended for acute infectious diarrhoea in primary care, as many cases are viral in origin and symptoms are often not shortened by antibiotics . There is also a risk of increasing bacterial resistance with empirical use .

However, antibiotics may be indicated in specific circumstances or for certain confirmed pathogens:

  • Amoebiasis (Amoebic Dysentery): Drug treatment, typically metronidazole followed by diloxanide, is usually recommended for all confirmed cases after specialist advice .
  • Giardiasis: Metronidazole is prescribed, either 2000 mg once daily for 3 days or 400 mg three times daily for 5 days .
  • Shigellosis: Antibiotic treatment is not usually needed for people with mild symptoms . However, if symptoms are severe (high fever, bloody and/or high-output diarrhoea) or the person is immunocompromised, specialist advice should be sought regarding the need for antibiotics .
  • Travellers' Diarrhoea: Antibiotics are not recommended for mild symptoms but should be used to treat moderate-to-severe symptoms .
  • Acute Diverticulitis: While not always primarily presenting as diarrhoea, antibiotics are considered if the person is systemically unwell, immunosuppressed, or has significant comorbidity . Oral antibiotics may be offered if systemically unwell but not meeting criteria for complicated acute diverticulitis . Intravenous antibiotics are offered for suspected complicated acute diverticulitis . For systemically well individuals with acute diverticulitis, a no-antibiotic prescribing strategy can be considered .

Antibiotic treatment is generally not needed for non-typhoidal Salmonellosis . There is no effective antibiotic treatment available for Shiga toxin-producing E. coli (STEC) infection .

For non-severe infections, consider taking microbiological samples before deciding on antimicrobial prescribing, provided it is safe to withhold treatment until results are available .

Educational content only. Always verify information and use clinical judgement.